$mu$NeuFMT: Optical-Property-Adaptive Fluorescence Molecular Tomography via Implicit Neural Representation

๐Ÿ“… 2025-11-06
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๐Ÿค– AI Summary
Fluorescence molecular tomography (FMT) reconstruction is severely limited by inaccurate or unknown tissue optical parameters, while existing supervised deep learning methods suffer from poor generalizability. To address this, we propose a self-supervised joint optimization framework thatโ€” for the first timeโ€”couples implicit neural representations (INRs) with a differentiable photon propagation physics model. This enables simultaneous reconstruction of fluorophore distribution and tissue optical parameters without ground-truth labels or precise prior knowledge of optical properties. Leveraging end-to-end differentiable rendering, our method achieves fully unsupervised optimization, eliminating reliance on large-scale annotated datasets or pre-specified parameters. We validate its robustness across numerical simulations, phantom experiments, and in vivo studies: even with initial optical parameter errors up to 50%, our approach significantly outperforms conventional model-based reconstruction and supervised deep learning methods.

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๐Ÿ“ Abstract
Fluorescence Molecular Tomography (FMT) is a promising technique for non-invasive 3D visualization of fluorescent probes, but its reconstruction remains challenging due to the inherent ill-posedness and reliance on inaccurate or often-unknown tissue optical properties. While deep learning methods have shown promise, their supervised nature limits generalization beyond training data. To address these problems, we propose $mu$NeuFMT, a self-supervised FMT reconstruction framework that integrates implicit neural-based scene representation with explicit physical modeling of photon propagation. Its key innovation lies in jointly optimize both the fluorescence distribution and the optical properties ($mu$) during reconstruction, eliminating the need for precise prior knowledge of tissue optics or pre-conditioned training data. We demonstrate that $mu$NeuFMT robustly recovers accurate fluorophore distributions and optical coefficients even with severely erroneous initial values (0.5$ imes$ to 2$ imes$ of ground truth). Extensive numerical, phantom, and in vivo validations show that $mu$NeuFMT outperforms conventional and supervised deep learning approaches across diverse heterogeneous scenarios. Our work establishes a new paradigm for robust and accurate FMT reconstruction, paving the way for more reliable molecular imaging in complex clinically related scenarios, such as fluorescence guided surgery.
Problem

Research questions and friction points this paper is trying to address.

Reconstructs fluorescence distribution without prior optical properties
Eliminates need for supervised training data in tomography
Jointly optimizes fluorescence and optical coefficients robustly
Innovation

Methods, ideas, or system contributions that make the work stand out.

Self-supervised framework integrating neural representation
Jointly optimizes fluorescence distribution and optical properties
Eliminates need for precise prior optical knowledge
S
Shihan Zhao
School of Information Science and Technology, ShanghaiTech University, Shanghai 201210, China
Jianru Zhang
Jianru Zhang
University of Birmingham
inverse problemimage processingoptical tomography
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Yanan Wu
School of Information Science and Technology, ShanghaiTech University, Shanghai 201210, China
Linlin Li
Linlin Li
School of Information Science and Technology, ShanghaiTech University, Shanghai 201210, China
Siyuan Shen
Siyuan Shen
School of Information Science and Technology, ShanghaiTech University
Computer visionComputational photography
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Xingjun Zhu
School of Physical Science and Technology, ShanghaiTech University, Shanghai 201210, China
G
Guoyan Zheng
Institute of Medical Robotics, School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
Jiahua Jiang
Jiahua Jiang
School of Mathematics, University of Birmingham, Edgbaston, B15 2QN, United Kingdom
Wuwei Ren
Wuwei Ren
School of Information Science and Technology, ShanghaiTech University, Shanghai 201210, China, and also with State Key Laboratory of Advanced Medical Materials and Devices, ShanghaiTech University, Shanghai 201210, China