Evaluating the Generalization of Neuroimaging Foundation Models on African Brain MRI

📅 2026-09-20
📈 Citations: 0
Influential: 0
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🤖 AI Summary
研究评估了四个神经影像基础模型在非洲脑MRI数据上的泛化能力,发现这些模型在非西方小规模临床队列中的细粒度诊断分类效果不佳,而端到端训练的ViT3D表现更优。
📝 Abstract
Neuroimaging foundation models pretrained on large, predominantly western cohorts are increasingly proposed as general-purpose backbones for brain MRI analysis. Yet, their ability to generalize to underrepresented clinical populations remains largely untested. We evaluate four recent foundation models (BrainIAC, Neuro-JEPA, NeuroVFM, and Primus) on a three-way diagnostic classification task (Control, Dementia, Parkinson's disease) using a cohort of 88 subjects from a Nigerian clinical brain MRI dataset, across four modality configurations (T1w, T2w, T1w+T2w, FLAIR), and compare against an end-to-end trained ViT3D baseline. The frozen backbones collapse to majority-class predictions, while Neuro-JEPA on FLAIR shows modest but still limited discrimination. In contrast, the end-to-end trained ViT3D achieves higher accuracy and MCC on every task (up to 53.4% accuracy, MCC=0.27) and is the only model with non-trivial recall. Our findings suggest that these frozen neuroimaging foundation models are insufficient for fine-grained diagnostic classification in small, non-western clinical cohorts, motivating parameter-efficient adaptation and broader multi-site external validation for equitable deployment in global health settings.
Problem

Research questions and friction points this paper is trying to address.

Neuroimaging foundation models
generalization
African Brain MRI
diagnostic classification
underrepresented clinical populations
Innovation

Methods, ideas, or system contributions that make the work stand out.

Neuroimaging Foundation Models
Generalization to African Brain MRI
End-to-End Trained ViT3D
Fine-Grained Diagnostic Classification
Equitable Deployment
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