Hierarchical Clustering and Signal Denoising on Digraphs

📅 2026-09-28
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This study addresses the challenges of directed graph clustering and signal denoising by proposing a spectral clustering framework that jointly accounts for connectivity and directionality. Methodologically, a Hermitian matrix is constructed to represent the directed graph structure, enabling hierarchical clustering through spectral decomposition combined with recursive K-means. Furthermore, the approach integrates hierarchical filtering with B-spline quasi-interpolation, achieving multiscale denoising and reconstruction of graph signals via adaptive thresholding. Experimental results on both synthetic and real-world datasets demonstrate that the proposed method significantly enhances clustering consistency while effectively improving signal recovery performance in terms of RMSE and SNR metrics.
📝 Abstract
In this paper, we propose a representation of a digraph (directed graph) as a Hermitian matrix derived from its adjacency matrix. This representation characterizes both the connectivity and the edge orientation of the digraph. Based on the spectral decomposition of the Hermitian matrix, a digraph clustering algorithm with $k$-means is introduced to produce a partition on the graph. Applying this algorithm (bottom-up) recursively to a digraph with partially labeled vertices yields a spectral hierarchical digraph clustering (\myproj) algorithm that produces consistent nested partitions of the digraph, or equivalently, a tree structure. Furthermore, based on the in-degree and out-degree of each cluster in the digraph clustering, a pair of hierarchical interval partitions (filtrations) can be derived in a top-down manner to produce a pair of nested knot sequences. These knot sequences facilitate the construction of multilevel spline quasi-interpolants, enabling a noisy graph signal to be decomposed into a coarse approximation and inter-level details, followed by adaptive thresholding and reconstruction. Experiments on synthetic and real-world digraphs demonstrate the superiority of our {\myproj} algorithm for digraph clustering across diverse graph structural properties (homophily and heterophily) and supervision settings. Moreover, experiments on digraph signal processing using multilevel spline quasi-interpolants further demonstrate the effectiveness of signal recovery on digraphs in terms of RMSE and SNR.
Problem

Research questions and friction points this paper is trying to address.

Directed Graphs
Hierarchical Clustering
Signal Denoising
Graph Signal Processing
Innovation

Methods, ideas, or system contributions that make the work stand out.

Directed Graphs
Hermitian Matrix
Spectral Hierarchical Clustering
Multilevel Spline Quasi-interpolants
Signal Denoising
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Yi Wang
Department of Mathematics, City University of Hong Kong, Hong Kong, SAR China
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Sippanon Kitimoon
Data Science Research Center, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand
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Hrushikesh N. Mhaskar
Institute of Mathematical Sciences, Claremont Graduate University, Claremont, CA 91711, USA
Xiaosheng Zhuang
Xiaosheng Zhuang
Department of Mathematics, City University of Hong Kong, Hong Kong, SAR China