Scholar
Shaika Chowdhury
Google Scholar ID: HLr1IZkAAAAJ
Mayo Clinic
Citations & Impact
Citations
253
H-index
8
i10-index
6
Publications
20
Co-authors
0
Contact
Publications
Resume (English only)
Academic Achievements
- Paper titled "Probing Fine-grained and Coarse-grained Embeddings with Large Language Models for Patient-Trial Matching using Siamese Neural Network" accepted as a poster at AMIA 2025 Annual Symposium.
- Joint work titled "Advancing Efficacy Prediction for EHR-based Emulated Trials in Repurposing Heart Failure Therapies" accepted to npj Digital Medicine 2025.
- Co-authored paper "Synoptic Reporting by Summarizing Cancer Pathology Reports using Large Language Models" accepted to npj Health Systems 2025.
- Paper "Stratifying heart failure patients with graph neural network and transformer using Electronic Health Records to optimize drug response prediction" published in Journal of the American Medical Informatics Association (JAMIA) 2024.
- Presented "Evaluation of GPT-3 for Anti-Cancer Drug Sensitivity Prediction" at AMIA Informatics Summit 2024.
- Presented "Drug Response Prediction and Phenomapping for Personalized Healthcare Management using EHR: A Graph-based Deep Learning Approach" at AMIA Clinical Informatics Conference 2024.
- Paper "Evaluating Drug Effectiveness for Antihypertensives in Heart Failure Prognosis: Leveraging Composite Clinical Endpoints and Biomarkers from Electronic Health Records" accepted and presented at ACM-BCB 2023.
- Co-authored paper "BETA: a comprehensive benchmark for computational drug-target prediction" published in Briefings in Bioinformatics 2022.
Co-authors