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Resume (English only)
Academic Achievements
Elastix - widely used open-source software for medical image registration, developed in collaboration with Marius Staring; nD+t image registration - an elegant framework for nonrigid registration of dynamic medical imaging data, developed in collaboration with Coert Metz; Groupwise registration for quantitative MRI - novel groupwise image registration method, comprehensively tested in 6 different medical applications (work by Wyke Huizinga); CADDementia challenge - an international Grand Challenge on computer-aided diagnosis of dementia, organized by Esther Bron; KNOAP2020 - an international Grand Challenge on knee osteoarthritis prediction, organized by Jukka Hirvasniemi; WORC - open-source software for fully automated radiomics analysis, developed by Martijn Starmans; DEBM - disease progression timeline estimation using discriminative event-based modeling, developed by Vikram Venkatraghavan; DeepDicomSort - use deep learning to automatically sort your brain MRI datasets! work by Sebastian van der Voort.
Research Experience
Research lines include Artificial Intelligence for Integrated Diagnostics (AIID), Applied Medical Image Analysis. Projects involved: Glioma Analysis, ICAIlab Trustworthy AI for MRI, AI4AI, EOSC4Cancer, EuCanImage, Eye2Brain, MERLIN, etc.
Education
PhD in Medical Image Analysis, 2008, UMC Utrecht; MSc in Mechanical Engineering, 2003, University of Twente.
Background
Interests: Medical Imaging, Machine learning, Image registration. Professional field: Applied Medical Image Analysis. Biography: Prof. Dr. ir. Stefan Klein is a Professor in Applied Medical Image Analysis. He is the General Chair of the Biomedical Imaging Group Rotterdam and holds a PI position at the department of Radiology and Nuclear Medicine of the Erasmus MC - University Medical Center Rotterdam, the Netherlands.
Miscellany
Besides performing research, Stefan is also active in setting up infrastructures that facilitate research in medical imaging. He has initiated a national Health-RI XNAT research archive for medical imaging data, is the Imaging Community manager at Health-RI, and director of the Euro-BioImaging Population Imaging node.