accelerated failure time modeling

Designs, fits, and evaluates parametric survival / time-to-event models that represent how covariates accelerate or decelerate the (often log) time until an event using the accelerated failure time (AFT) parameterization. Variants include Weibull AFT baselines and versions with time-varying covariates, and are used to model continuous-time event arrival times, forecast event timing, estimate survival functions, and quantify covariate effects on time acceleration or deceleration.

acceleratedfailuretimemodeling

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Deep Neural Network‐Based Accelerated Failure Time Models Using Rank Loss

Jun 13, 2022
GK
Gwangsun Kim
🏛️ Jeonbuk National University | Yonsei University

Most existing Accelerated Failure Time (AFT) models assume a linear relationship between covariates and log-survival time, limiting their ability to capture complex nonlinear effects. To address this, we propose DeepR-AFT—the first end-to-end semiparametric AFT framework that couples deep neural networks with a Gehan-type rank-based loss function, enabling direct modeling of high-dimensional, nonlinear covariate effects on log-survival time without prespecifying the error distribution. Our method incorporates a subsampling optimization strategy to enhance training stability and integrates an interpretability module to improve model transparency. Extensive experiments on simulated data and three real-world right-censored datasets demonstrate that DeepR-AFT significantly outperforms classical parametric and semiparametric AFT models, particularly in scenarios involving nonlinear covariate structures and high-dimensional feature spaces, achieving superior predictive accuracy and robustness.

Address nonlinearity in predictors for AFT modelsHandle high-dimensional covariates in survival analysisImprove AFT model performance with deep neural networks

Diagnostics for Semiparametric Accelerated Failure Time Models with R Package afttest

Nov 13, 2025
WB
Woojung Bae
🏛️ University of Florida | Duke University | University of Connecticut | Yonsei University

Semiparametric accelerated failure time (AFT) models lack systematic diagnostic tools; existing methods inadequately assess overall model adequacy, link function specification, and functional forms of covariates. Method: We propose the first comprehensive diagnostic framework specifically for semiparametric AFT models, implemented in the R package `afttest`. The framework employs Kolmogorov-type test statistics based on transformed aggregated martingale residual processes, with the multiplier bootstrap used to efficiently approximate the null distribution. It further provides visualization tools to compare observed residual paths against simulated ones. Contribution/Results: The method supports simultaneous hypothesis testing under both rank-based and least-squares estimation, enabling the first joint diagnostic assessment of key AFT model assumptions—including linearity, proportional effects, and link function correctness. Empirical evaluation on the Mayo primary biliary cirrhosis dataset demonstrates high statistical power and interpretability.

Diagnostic tools for semiparametric AFT models are underdevelopedImplements statistical tests and graphical diagnostics for AFT modelsPackage evaluates model assumptions and covariate functional forms

Characterizing quantile-varying covariate effects under the accelerated failure time model.

Jan 04, 2023
HT
Harrison T. Reeder
🏛️ Harvard Medical School | Harvard T.H. Chan School of Public Health | Massachusetts General Hospital

Traditional accelerated failure time (AFT) models assume constant covariate effects across all survival quantiles, limiting their ability to capture effect heterogeneity. To address this, we propose an interpretable, quantile-dependent multiplicative effects framework—the first to derive closed-form analytic expressions for covariate effects on the quantile scale within the AFT paradigm. Integrating the g-formula, our approach enables standardized estimation of both conditional and marginal effects under left truncation and arbitrary censoring mechanisms. The method combines Bayesian inference, flexible nonlinear functional forms, and quantile-specific posterior inference. Evaluated in an Alzheimer’s disease cohort, it robustly uncovers distinct influences of age, APOE status, and other covariates on early versus late survival quantiles—revealing previously undetected effect heterogeneity. This enhances both statistical precision and clinical interpretability of survival effect estimates.

Develops a framework for quantile-varying covariate effects in survival analysisEnables estimation of interpretable effects on survival quantiles with Bayesian methodsProposes flexible regression structures within the accelerated failure time model

This study addresses the challenge of robust inference for a target exposure variable in partially linear accelerated failure time (AFT) models with right-censored data. The authors propose, for the first time, a rank-based debiased machine learning framework that integrates orthogonalized rank-based U-statistics, censoring-corrected influence functions, and a block-pair cross-fitting strategy. This approach overcomes two critical limitations: the lack of Neyman orthogonality in conventional U-statistics and the inapplicability of standard cross-fitting under censoring. The method accommodates flexible covariate adjustment and enables valid inference even in finite samples. Extensive simulations and an application to electronic health records from the All of Us Research Program demonstrate its strong statistical performance and practical utility.

Accelerated Failure Time modelDebiased Machine LearningPartially Linear Model

This study addresses the limitations of overly restrictive parametric assumptions on baseline functions and the challenges of model selection in survival analysis. We propose a semi-parametric time-to-event regression method based on Bernstein polynomials, implemented in the R package spsurv. By avoiding prespecified baseline distributions, this approach enables smooth estimation of the baseline hazard and supports both Bayesian inference and maximum likelihood estimation via Stan. It unifies the interfaces for proportional hazards, proportional odds, and accelerated failure time models while preserving intuitive effect interpretations. Monte Carlo simulations demonstrate the method's robustness in finite samples, and its practical utility is illustrated through an application to oncology clinical trial data. Overall, this work provides a flexible and efficient tool for survival modeling.

baseline function estimationR packageright-censored data

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This study addresses the inefficiency and bias introduced by right-censored covariates in survival analysis, which commonly undermine conventional approaches such as complete-case analysis. Within the Cox proportional hazards framework, the authors propose a novel method that incorporates a weighted averaging strategy into the partial likelihood function: for observations with censored covariates, the corresponding relative risk is replaced by a weighted average derived from fully observed cases. By directly leveraging the censoring information rather than discarding incomplete cases or imputing constant values, the approach mitigates estimation bias. Extensive simulations and analyses of two oncology clinical trials demonstrate that the proposed method substantially improves estimation efficiency and data utilization, outperforming existing strategies for handling censored covariates.

censored covariatesCox modelright censoring

This study addresses the limitations of traditional joint models in clinical longitudinal studies, where repeatedly measured biomarkers or quality-of-life outcomes are often associated with event times but constrained by the proportional hazards assumption, hindering interpretability on the time scale. The authors propose a class of Bayesian semiparametric accelerated failure time joint models that integrate linear mixed-effects models for the longitudinal process and employ Bernstein polynomials to flexibly model the baseline hazard. A time-warping rescaling strategy is introduced to enhance numerical stability and parameter identifiability. By relaxing the proportional hazards assumption, the proposed approach offers more intuitive time-scale interpretations. Simulation studies demonstrate that, when event risk depends on underlying longitudinal trajectories, the method yields more accurate estimates of treatment effects compared to separate modeling approaches and exhibits excellent finite-sample performance.

accelerated failure timeinformative censoringjoint modelling

This work addresses the challenge of survival analysis with right-censored data by proposing a training-free, end-to-end approach that introduces tabular foundation models (TFMs) into survival analysis for the first time. The method integrates the accelerated failure time (AFT) model with the Buckley–James estimator to perform nonparametric, iterative imputation of censored times within context. Requiring only the estimation of a single scalar parameter and no task-specific training, it effectively handles right-censoring while maintaining computational simplicity. On standard benchmarks, the proposed approach matches or even surpasses the performance of trained Cox regression and parametric AFT models, substantially enhancing the practicality and competitiveness of zero-shot survival regression.

Right-censoringSurvival AnalysisTabular Foundation Models

This study addresses the lack of exact inferential methods for reliability analysis of lifetime distributions—such as the Weibull and log-logistic—under Type-I censoring or small-sample settings. The authors propose a novel framework for exact parametric inference based on survival function reconstruction, overcoming limitations of conventional approaches that rely on asymptotic approximations or bootstrap techniques. For the first time, this method enables exact hypothesis testing and confidence interval construction for Type-I censored data across several widely used lifetime distributions. Extensive simulations demonstrate that the proposed approach substantially outperforms existing methods in both complete and censored data scenarios. Its practical utility is further corroborated through two real-world engineering case studies.

exact inferencesmall samplesurvival reliability

Traditional parametric approaches often fail to accurately model complex time-to-event data in clinical trials due to their reliance on prespecified hazard function forms. This work proposes a joint simulation framework based on empirical copulas that integrates nonparametric reconstruction with parametric tail modeling. The method handles right censoring via conditional Kaplan–Meier imputation, models marginal distributions through log-scale location–scale transformations and power distortion of quantile functions, and preserves multivariate rank correlation structures using a Gaussian copula. Remarkably, the approach can reproduce treatment-group survival curves using only a few target quantiles. Applied to a non-small cell lung cancer trial, it successfully replicated both overall survival and progression-free survival curves, yielding a simulated censored Kendall’s tau of 0.522—closely approximating the observed value of 0.549.

clinical trial designempirical simulationmixed-type data

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